2OT7 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ALY, MLZ, NI, OGA, ZN BindingDB enzyme
Primary referenceCrystal structures of histone demethylase JMJD2A reveal basis for substrate specificity., Ng SS, Kavanagh KL, McDonough MA, Butler D, Pilka ES, Lienard BM, Bray JE, Savitsky P, Gileadi O, von Delft F, Rose NR, Offer J, Scheinost JC, Borowski T, Sundstrom M, Schofield CJ, Oppermann U, Nature. 2007 Jul 5;448(7149):87-91. Epub 2007 Jun 24. PMID:17589501
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (127 Kb) [Save to disk]
  • Biological Unit Coordinates (2ot7.pdb1.gz) 61 Kb
  • Biological Unit Coordinates (2ot7.pdb2.gz) 62 Kb
  • LPC: Ligand-Protein Contacts for 2OT7
  • CSU: Contacts of Structural Units for 2OT7
  • Likely Quarternary Molecular Structure file(s) for 2OT7
  • Structure Factors (2209 Kb)
  • Retrieve 2OT7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OT7 from S2C, [Save to disk]
  • Re-refined 2ot7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OT7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ot7_B] [2ot7] [2ot7_A] [2ot7_C] [2ot7_D]
  • SWISS-PROT database: [O75164]
  • Domains found in 2OT7: [JmjC] [JmjN ] by SMART

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