2OU0	Hydrolase	date	Feb 09, 2007
title	1-Methylpyrrole In Complex With T4 Lysozyme L99a
authors	A.P.Graves, B.K.Shoichet
compound		source
Molecule: Lysozyme Chain: X Synonym: Lysis Protein, Muramidase, Endolysin Ec: 3.2.1.17 Engineered: Yes		Organism_scientific: Enterobacteria Phage T4 Organism_taxid: 10665 Gene: E Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: M13
symmetry	Space Group: P 32 2 1	R_factor 0.191 R_Free 0.234
crystal cell	length a length b length c angle alpha angle beta angle gamma 60.205 60.205 96.372 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	1.94 Å
ligand	MR3, PO4	enzyme	Hydrolase E.C.3.2.1.17 BRENDA
Gene Ontology	Chain Function Process Component X
Primary reference	Predicting absolute ligand binding free energies to a simple model site., Mobley DL, Graves AP, Chodera JD, McReynolds AC, Shoichet BK, Dill KA, J Mol Biol. 2007 Aug 24;371(4):1118-34. Epub 2007 Jun 8. PMID:17599350

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk] Biological Unit Coordinates (2ou0.pdb1.gz) 30 Kb LPC: Ligand-Protein Contacts for 2OU0 CSU: Contacts of Structural Units for 2OU0 Likely Quarternary Molecular Structure file(s) for 2OU0 Structure Factors (114 Kb) Retrieve 2OU0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OU0 from S2C, [Save to disk] Re-refined 2ou0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OU0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OU0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OU0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ou0_X] [2ou0] SWISS-PROT database: [P00720] Domain organization of [LYS_BPT4] by SWISSPFAM

Other resources with information on 2OU0

Community annotation for 2OU0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---