2OUI Oxidoreductase date Feb 11, 2007
title D275p Mutant Of Alcohol Dehydrogenase From Protozoa Entamoeb Histolytica
authors F.Frolow, L.Shimon, Y.Burstein, E.Goihberg, M.Peretz, O.Dym
compound source
Molecule: Nadp-Dependent Alcohol Dehydrogenase
Chain: A, B, C, D
Ec: 1.1.1.2
Engineered: Yes
Mutation: Yes
Organism_scientific: Entamoeba Histolytica
Organism_taxid: 5759
Gene: Adh1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Tg-I
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Bs-P58
symmetry Space Group: C 1 2 1
R_factor 0.148 R_Free 0.178
crystal
cell
length a length b length c angle alpha angle beta angle gamma
145.921 144.104 80.073 90.00 121.44 90.00
method X-Ray Diffractionresolution 1.77 Å
ligand 1PE, CAC, CL, EDO, NO3, PG4, PGE, ZN enzyme Oxidoreductase E.C.1.1.1.2 BRENDA
note 2OUI is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceThermal stabilization of the protozoan Entamoeba histolytica alcohol dehydrogenase by a single proline substitution., Goihberg E, Dym O, Tel-Or S, Shimon L, Frolow F, Peretz M, Burstein Y, Proteins. 2008 Feb 7;. PMID:18260103
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (246 Kb) [Save to disk]
  • Biological Unit Coordinates (2oui.pdb1.gz) 240 Kb
  • LPC: Ligand-Protein Contacts for 2OUI
  • CSU: Contacts of Structural Units for 2OUI
  • Likely Quarternary Molecular Structure file(s) for 2OUI
  • Structure Factors (1072 Kb)
  • Retrieve 2OUI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2OUI from S2C, [Save to disk]
  • Re-refined 2oui structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2OUI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2OUI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2OUI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2oui_D] [2oui] [2oui_C] [2oui_A] [2oui_B]
  • SWISS-PROT database: [P35630]
  • Domain organization of [ADH1_ENTHI] by SWISSPFAM
  • Other resources with information on 2OUI
  • Community annotation for 2OUI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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