2OWD	Hydrolase	date	Feb 16, 2007
title	Crystal Structure Of Tthb049 From Thermus Thermophilus Hb8
authors	M.Sugahara, M.Taketa, N.Ono, Y.Matsuura, N.Kunishima, Riken Struc Genomicsproteomics Initiative (Rsgi)
compound		source
Molecule: Alpha-Ribazole-5'-Phosphate Phosphatase Chain: A, B Synonym: Tthb049 Protein Ec: 3.1.3.- Engineered: Yes Mutation: Yes		Organism_scientific: Thermus Thermophilus Organism_taxid: 300852 Strain: Hb8 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-11a
symmetry	Space Group: I 2 2 2	R_factor 0.212 R_Free 0.218
crystal cell	length a length b length c angle alpha angle beta angle gamma 84.176 92.152 112.502 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.65 Å
ligand	GOL, NA	enzyme	Hydrolase E.C.3.1.3 BRENDA
Gene Ontology	Chain Function Process Component A, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk] Biological Unit Coordinates (2owd.pdb1.gz) 61 Kb LPC: Ligand-Protein Contacts for 2OWD CSU: Contacts of Structural Units for 2OWD Likely Quarternary Molecular Structure file(s) for 2OWD Structure Factors (432 Kb) Retrieve 2OWD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2OWD from S2C, [Save to disk] Re-refined 2owd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2OWD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2OWD

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2OWD, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2owd_A] [2owd_B] [2owd] SWISS-PROT database: [Q53WB3] Domain organization of [Q53WB3_THET8] by SWISSPFAM Domain found in 2OWD: [PGAM ] by SMART

Other resources with information on 2OWD

Community annotation for 2OWD at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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