2P8U	Transferase	date	Mar 23, 2007
title	Crystal Structure Of Human 3-Hydroxy-3-Methylglutaryl Coa Sy
authors	A.Turnbull, N.Shafqat, E.Salah, F.H.Niesen, N.Burgess, G.Bunkoczi J.Debreczeni, A.C.W.Pike, C.Umeano, F.Gorrec, F.Von Delft, J.Wei C.H.Arrowsmith, M.Sundstrom, A.Edwards, U.Oppermann, Structural Consortium (Sgc)
compound		source
Molecule: Hydroxymethylglutaryl-Coa Synthase, Cytoplasmic Chain: A, B Synonym: Hmg-Coa Synthase, 3-Hydroxy-3-Methylglutaryl Coenz Synthase; Ec: 2.3.3.10 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Hmgcs1, Hmgcs Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3)-R3rosetta Expression_system_vector_type: Plasmid Expression_system_plasmid: Pnic28-Bsa4
symmetry	Space Group: P 43 21 2	R_factor 0.159 R_Free 0.202
crystal cell	length a length b length c angle alpha angle beta angle gamma 92.762 92.762 235.532 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	COA, GOL, SCY	enzyme	Transferase E.C.2.3.3.10 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Crystal Structures of Human HMG-CoA Synthase Isoforms Provide Insights into Inherited Ketogenesis Disorders and Inhibitor Design., Shafqat N, Turnbull A, Zschocke J, Oppermann U, Yue WW, J Mol Biol. 2010 Mar 25. PMID:20346956

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (165 Kb) [Save to disk] Biological Unit Coordinates (2p8u.pdb1.gz) 158 Kb LPC: Ligand-Protein Contacts for 2P8U CSU: Contacts of Structural Units for 2P8U Likely Quarternary Molecular Structure file(s) for 2P8U Structure Factors (550 Kb) Retrieve 2P8U in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2P8U from S2C, [Save to disk] Re-refined 2p8u structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2P8U in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2P8U

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2P8U, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2p8u_A] [2p8u_B] [2p8u] SWISS-PROT database: [Q01581] Domain organization of [HMCS1_HUMAN] by SWISSPFAM

Other resources with information on 2P8U

Community annotation for 2P8U at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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