2PDR date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand FAD enzyme
note 2PDR (Molecule of the Month:pdb183)
Primary referenceConformational switching in the fungal light sensor Vivid., Zoltowski BD, Schwerdtfeger C, Widom J, Loros JJ, Bilwes AM, Dunlap JC, Crane BR, Science. 2007 May 18;316(5827):1054-7. PMID:17510367
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (123 Kb) [Save to disk]
  • Biological Unit Coordinates (2pdr.pdb1.gz) 31 Kb
  • Biological Unit Coordinates (2pdr.pdb2.gz) 31 Kb
  • Biological Unit Coordinates (2pdr.pdb3.gz) 31 Kb
  • Biological Unit Coordinates (2pdr.pdb4.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 2PDR
  • CSU: Contacts of Structural Units for 2PDR
  • Likely Quarternary Molecular Structure file(s) for 2PDR
  • Structure Factors (889 Kb)
  • Retrieve 2PDR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PDR from S2C, [Save to disk]
  • Re-refined 2pdr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2PDR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2pdr] [2pdr_A] [2pdr_B] [2pdr_C] [2pdr_D]
  • SWISS-PROT database: [Q9C3Y6]
  • Domain found in 2PDR: [PAC ] by SMART

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