2PXI date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, DOC, GFH, MG, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference(R)-beta,gamma-fluoromethylene-dGTP-DNA ternary complex with DNA polymerase beta., McKenna CE, Kashemirov BA, Upton TG, Batra VK, Goodman MF, Pedersen LC, Beard WA, Wilson SH, J Am Chem Soc. 2007 Dec 19;129(50):15412-3. Epub 2007 Nov 22. PMID:18031037
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (2pxi.pdb1.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 2PXI
  • CSU: Contacts of Structural Units for 2PXI
  • Likely Quarternary Molecular Structure file(s) for 2PXI
  • Structure Factors (191 Kb)
  • Retrieve 2PXI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2PXI from S2C, [Save to disk]
  • Re-refined 2pxi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2PXI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2pxi] [2pxi_A] [2pxi_D] [2pxi_P] [2pxi_T]
  • SWISS-PROT database: [P06746]
  • Domains found in 2PXI: [HhH1] [POLXc ] by SMART

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