2Q6O Biosynthetic Protein date Jun 05, 2007
title Sall-Y70t With Sam And Cl
authors J.P.Noel, F.Pojer
compound source
Molecule: Hypothetical Protein
Chain: A, B
Engineered: Yes
Mutation: Yes
Organism_scientific: Salinispora Tropica
Organism_taxid: 369723
Strain: Cnb-440
Gene: Sall
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Phis8
symmetry Space Group: P 3
R_factor 0.266 R_Free 0.313
crystal
cell
length a length b length c angle alpha angle beta angle gamma
111.530 111.530 47.610 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand CL, SAM enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDiscovery and characterization of a marine bacterial SAM-dependent chlorinase., Eustaquio AS, Pojer F, Noel JP, Moore BS, Nat Chem Biol. 2008 Jan;4(1):69-74. Epub 2007 Dec 2. PMID:18059261
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (91 Kb) [Save to disk]
  • Biological Unit Coordinates (2q6o.pdb1.gz) 124 Kb
  • Biological Unit Coordinates (2q6o.pdb2.gz) 43 Kb
  • Biological Unit Coordinates (2q6o.pdb3.gz) 124 Kb
  • LPC: Ligand-Protein Contacts for 2Q6O
  • CSU: Contacts of Structural Units for 2Q6O
  • Likely Quarternary Molecular Structure file(s) for 2Q6O
  • Structure Factors (614 Kb)
  • Retrieve 2Q6O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Q6O from S2C, [Save to disk]
  • Re-refined 2q6o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Q6O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2Q6O
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2Q6O, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2q6o_A] [2q6o] [2q6o_B]
  • SWISS-PROT database: [A4X3Q0]
  • Domain organization of [A4X3Q0_SALTO] by SWISSPFAM
  • Other resources with information on 2Q6O
  • Community annotation for 2Q6O at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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