2QGG Structural Genomics, Unknown Function date Jun 28, 2007
title X-Ray Structure Of The Protein Q6f7i0 From Acinetobacter Cal Amms 248. Northeast Structural Genomics Consortium Target A
authors A.P.Kuzin, M.Su, S.Jayaraman, D.Wang, H.Janjua, K.Cunningham, L.C R.Xiao, J.Liu, M.C.Baran, T.B.Acton, B.Rost, G.T.Montelione, J.F. L.Tong, Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: 16s Rrna-Processing Protein Rimm
Chain: A
Engineered: Yes
Mutation: Yes
 Organism_scientific: Acinetobacter Calcoaceticus
Organism_taxid: 471
Strain: Adp1, Amms 248
Gene: Rimm, Aciad3312
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
symmetry Space Group: P 1 2 1
R_factor 0.207 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.899 37.588 69.200 90.00 97.23 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand K, MSE, UNL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • Biological Unit Coordinates (2qgg.pdb1.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 2QGG
  • CSU: Contacts of Structural Units for 2QGG
  • Likely Quarternary Molecular Structure file(s) for 2QGG
  • Structure Factors (135 Kb)
  • Retrieve 2QGG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QGG from S2C, [Save to disk]
  • Re-refined 2qgg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2QGG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2QGG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2QGG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qgg] [2qgg_A]
  • SWISS-PROT database: [Q6F7I0]
  • Domain organization of [RIMM_ACIAD] by SWISSPFAM
    • Other resources with information on 2QGG
  • Community annotation for 2QGG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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