2QJE Hydrolase date Jul 07, 2007
title Crystal Structure Of The Complex Of Bovine C-Lobe With Amygd 2.3a Resolution
authors R.Mir, R.Jain, S.Kumar, M.Sinha, N.Singh, S.Sharma, P.Kaur, A.Srini A.Bhushan, T.P.Singh
compound source
Molecule: Lactotransferrin
Chain: A
Fragment: Unp Residues 361-708
Synonym: Lactoferrin
Ec: 3.4.21.-
 Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
symmetry Space Group: P 1 21 1
R_factor 0.223 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
63.368 50.368 65.969 90.00 107.71 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand BMA, CO3, FE, NAG, SO4, TVY, Z8T, ZN enzyme Hydrolase E.C.3.4.21 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk]
  • Biological Unit Coordinates (2qje.pdb1.gz) 59 Kb
  • LPC: Ligand-Protein Contacts for 2QJE
  • CSU: Contacts of Structural Units for 2QJE
  • Likely Quarternary Molecular Structure file(s) for 2QJE
  • Structure Factors (275 Kb)
  • Retrieve 2QJE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QJE from S2C, [Save to disk]
  • Re-refined 2qje structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2QJE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2QJE
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2QJE, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qje_A] [2qje]
  • SWISS-PROT database: [P24627]
  • Domain organization of [TRFL_BOVIN] by SWISSPFAM
  • Domain found in 2QJE: [TR_FER ] by SMART
    • Other resources with information on 2QJE
  • Community annotation for 2QJE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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