2QO7 Human EphA3 kinase and juxtamembrane region, dephosphorylated, AMP-PNP bound date
authors Davis, T., Walker, J.R., Newman, E.M., Mackenzie, F., Butler-Cole, C., Weigelt, J., Sundstrom, M., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.224
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.60
ligand ANP, BME, GOL, MG, PTR enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAutoregulation by the Juxtamembrane Region of the Human Ephrin Receptor Tyrosine Kinase A3 (EphA3)., Davis TL, Walker JR, Loppnau P, Butler-Cole C, Allali-Hassani A, Dhe-Paganon S, Structure. 2008 Jun;16(6):873-84. PMID:18547520
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (2qo7.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 2QO7
  • CSU: Contacts of Structural Units for 2QO7
  • Likely Quarternary Molecular Structure file(s) for 2QO7
  • Structure Factors (570 Kb)
  • Retrieve 2QO7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QO7 from S2C, [Save to disk]
  • Re-refined 2qo7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2QO7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2QO7
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2QO7, from MSDmotif at EBI
  • Fold representative 2qo7 from FSSP and Dali (Families of Structurally Similar Proteins)
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qo7] [2qo7_A]
  • SWISS-PROT database: [P29320]
  • Domain organization of [EPHA3_HUMAN] by SWISSPFAM
  • Domain found in 2QO7: [TyrKc ] by SMART
    • Other resources with information on 2QO7
  • Community annotation for 2QO7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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