2QPD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CU1, CUA, HAS, HEM	enzyme
Gene Ontology	Chain Function Process Component A cytochrome-c oxidase activit... B cytochrome-c oxidase activit... C
Primary reference	An unexpected outcome of surface engineering an integral membrane protein: improved crystallization of cytochrome ba(3) from Thermus thermophilus., Liu B, Luna VM, Chen Y, Stout CD, Fee JA, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2007 Dec 1;63(Pt, 12):1029-34. Epub 2007 Nov 21. PMID:18084085

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (130 Kb) [Save to disk] Biological Unit Coordinates (2qpd.pdb1.gz) 122 Kb LPC: Ligand-Protein Contacts for 2QPD CSU: Contacts of Structural Units for 2QPD Likely Quarternary Molecular Structure file(s) for 2QPD Structure Factors (290 Kb) Retrieve 2QPD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2QPD from S2C, [Save to disk] Re-refined 2qpd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2QPD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2qpd] [2qpd_A] [2qpd_B] [2qpd_C] SWISS-PROT database: [Q5SJ79] [Q5SJ80] [P82543] Belongs to the proton-translocating cytochrome oxidase (cox) superfamily according to TCDB.

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