2QR3 Transcription date Jul 27, 2007
title Crystal Structure Of The N-Terminal Signal Receiver Domain O Component System Response Regulator From Bacteroides Fragil
authors J.B.Bonanno, J.Freeman, K.T.Bain, M.Mendoza, R.Romero, R.Fong, D.S S.Wasserman, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Res Center For Structural Genomics (Nysgxrc)
compound source
Molecule: Two-Component System Response Regulator
Chain: A
Fragment: Signal Receiver Domain: Residues 2-130
Engineered: Yes
Organism_scientific: Bacteroides Fragilis
Organism_taxid: 295405
Strain: Ych46
Gene: Bf2150
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet
Expression_system_plasmid: Modified Pet26
symmetry Space Group: P 31 2 1
R_factor 0.202 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.044 56.044 73.622 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.80 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (2qr3.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 2QR3
  • Structure Factors (88 Kb)
  • Retrieve 2QR3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QR3 from S2C, [Save to disk]
  • Re-refined 2qr3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2QR3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2QR3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2QR3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qr3] [2qr3_A]
  • SWISS-PROT database: [Q64UD2]
  • Domain organization of [Q64UD2_BACFR] by SWISSPFAM
  • Domain found in 2QR3: [REC ] by SMART
  • Other resources with information on 2QR3
  • Community annotation for 2QR3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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