2QV0 Transcription date Aug 07, 2007
title Crystal Structure Of The Response Regulatory Domain Of Prote From Klebsiella Pneumoniae
authors J.B.Bonanno, J.Freeman, K.T.Bain, I.Iizuka, S.Ozyurt, D.Smith, S.W J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgx Research Center Structural Genomics (Nysgxrc)
compound source
Molecule: Protein Mrke
Chain: A, B
Fragment: Response Regulatory Domain: Residues 52-183
Engineered: Yes
 Organism_scientific: Klebsiella Pneumoniae
Organism_taxid: 573
Strain: Ia565
Gene: Mrke
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet
Expression_system_plasmid: Modified Pet26
symmetry Space Group: P 61
R_factor 0.220 R_Free 0.282
crystal
cell
length a length b length c angle alpha angle beta angle gamma
56.239 56.239 188.037 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.40 Å
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (2qv0.pdb1.gz) 40 Kb
  • Biological Unit Coordinates (2qv0.pdb2.gz) 40 Kb
  • CSU: Contacts of Structural Units for 2QV0
  • Likely Quarternary Molecular Structure file(s) for 2QV0
  • Structure Factors (93 Kb)
  • Retrieve 2QV0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2QV0 from S2C, [Save to disk]
  • Re-refined 2qv0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2QV0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2QV0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2QV0, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2qv0_B] [2qv0] [2qv0_A]
  • SWISS-PROT database: [P21649]
  • Domain organization of [MRKE_KLEPN] by SWISSPFAM
  • Domain found in 2QV0: [REC ] by SMART
    • Other resources with information on 2QV0
  • Community annotation for 2QV0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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