2R2D date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, PO4, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, A, B, E, C, F


Primary referenceStructure and Specificity of a Quorum-Quenching Lactonase (AiiB) from Agrobacterium tumefaciens(,)., Liu D, Thomas PW, Momb J, Hoang QQ, Petsko GA, Ringe D, Fast W, Biochemistry. 2007 Sep 28;. PMID:17900178
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (611 Kb) [Save to disk]
  • Biological Unit Coordinates (2r2d.pdb1.gz) 208 Kb
  • Biological Unit Coordinates (2r2d.pdb2.gz) 209 Kb
  • Biological Unit Coordinates (2r2d.pdb3.gz) 198 Kb
  • Biological Unit Coordinates (2r2d.pdb4.gz) 605 Kb
  • Biological Unit Coordinates (2r2d.pdb5.gz) 106 Kb
  • Biological Unit Coordinates (2r2d.pdb6.gz) 100 Kb
  • Biological Unit Coordinates (2r2d.pdb7.gz) 107 Kb
  • Biological Unit Coordinates (2r2d.pdb8.gz) 107 Kb
  • Biological Unit Coordinates (2r2d.pdb9.gz) 108 Kb
  • LPC: Ligand-Protein Contacts for 2R2D
  • CSU: Contacts of Structural Units for 2R2D
  • Likely Quarternary Molecular Structure file(s) for 2R2D
  • Structure Factors (2788 Kb)
  • Retrieve 2R2D in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2R2D from S2C, [Save to disk]
  • Re-refined 2r2d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2R2D in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2r2d] [2r2d_A] [2r2d_B] [2r2d_C] [2r2d_D] [2r2d_E] [2r2d_F]
  • SWISS-PROT database: [A9CKY2]
  • Domain found in 2R2D: [Lactamase_B ] by SMART

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