2R9R Membrane Protein, Transport Protein date Sep 13, 2007
title Shaker Family Voltage Dependent Potassium Channel (Kv1.2-Kv2 Chimera Channel) In Association With Beta Subunit
authors S.B.Long, X.Tao, E.B.Campbell, R.Mackinnon
compound source
Molecule: Voltage-Gated Potassium Channel Subunit Beta-2
Chain: A, G
Synonym: K+, Channel Subunit Beta-2, Kv-Beta-2
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Gene: Kcnab2, Ckbeta2, Kcnb3
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922

Molecule: Paddle Chimera Voltage Gated Potassium Channel Kv
Chain: B, H
Engineered: Yes

Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Gene: Kcna2
Expression_system: Pichia Pastoris
Expression_system_taxid: 4922
symmetry Space Group: P 4 21 2
R_factor 0.212 R_Free 0.244
crystal
cell
length a length b length c angle alpha angle beta angle gamma
144.049 144.049 284.397 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand K, NAP, PGW enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, G
  • voltage-gated ion channel ac...
  • voltage-gated potassium chan...


  • H, B


    Primary referenceAtomic structure of a voltage-dependent K+ channel in a lipid membrane-like environment., Long SB, Tao X, Campbell EB, MacKinnon R, Nature. 2007 Nov 15;450(7168):376-82. PMID:18004376
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (244 Kb) [Save to disk]
  • Biological Unit Coordinates (2r9r.pdb1.gz) 479 Kb
  • Biological Unit Coordinates (2r9r.pdb2.gz) 450 Kb
  • Biological Unit Coordinates (2r9r.pdb3.gz) 924 Kb
  • Biological Unit Coordinates (2r9r.pdb4.gz) 217 Kb
  • Biological Unit Coordinates (2r9r.pdb5.gz) 267 Kb
  • Biological Unit Coordinates (2r9r.pdb6.gz) 215 Kb
  • Biological Unit Coordinates (2r9r.pdb7.gz) 239 Kb
  • LPC: Ligand-Protein Contacts for 2R9R
  • CSU: Contacts of Structural Units for 2R9R
  • Likely Quarternary Molecular Structure file(s) for 2R9R
  • Structure Factors (1021 Kb)
  • Retrieve 2R9R in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2R9R from S2C, [Save to disk]
  • Re-refined 2r9r structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2R9R in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2R9R
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2R9R, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2r9r_B] [2r9r_G] [2r9r] [2r9r_H] [2r9r_A]
  • SWISS-PROT database: [P62483] [P63142]
  • Domain organization of [KCAB2_RAT] [KCNA2_RAT] by SWISSPFAM
  • Domain found in 2R9R: [BTB ] by SMART
  • Other resources with information on 2R9R
  • Community annotation for 2R9R at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science