2REI Transferase date Sep 26, 2007
title Kinase Domain Of Human Ephrin Type-A Receptor 7 (Epha7)
authors J.R.Walker, D.Cuerrier, C.Butler-Cole, J.Weigelt, C.H.Arrowsmith A.M.Edwards, A.Bochkarev, S.Dhe-Paganon, Structural Genomics C (Sgc)
compound source
Molecule: Ephrin Type-A Receptor 7
Chain: A
Fragment: Kinase Domain: Residues 590-899
Synonym: Tyrosine-Protein Kinase Receptor Ehk-3, Eph Homolo 3, Receptor Protein-Tyrosine Kinase Hek11;
Ec: 2.7.10.1
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Tissue: Brain
Gene: Epha7, Ehk3, Hek11
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pnic-Ch
symmetry Space Group: P 65
R_factor 0.163 R_Free 0.187
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.880 51.880 215.500 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.60 Å
ligand MPD enzyme Transferase E.C.2.7.10.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (103 Kb) [Save to disk]
  • Biological Unit Coordinates (2rei.pdb1.gz) 97 Kb
  • LPC: Ligand-Protein Contacts for 2REI
  • CSU: Contacts of Structural Units for 2REI
  • Likely Quarternary Molecular Structure file(s) for 2REI
  • Structure Factors (287 Kb)
  • Retrieve 2REI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2REI from S2C, [Save to disk]
  • Re-refined 2rei structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2REI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2REI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2REI, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rei] [2rei_A]
  • SWISS-PROT database: [Q15375]
  • Domain organization of [EPHA7_HUMAN] by SWISSPFAM
  • Domain found in 2REI: [TyrKc ] by SMART
    • Other resources with information on 2REI
  • Community annotation for 2REI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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