2RH8	Oxidoreductase	date	Oct 08, 2007
title	Structure Of Apo Anthocyanidin Reductase From Vitis Vinifera
authors	M.Gargouri, C.Mauge, B.Langlois D'Estaintot, T.Granier, C.Maniga B.Gallois
compound		source
Molecule: Anthocyanidin Reductase Chain: A Ec: 1.3.1.77 Engineered: Yes		Organism_scientific: Vitis Vinifera Organism_common: Grape Organism_taxid: 29760 Gene: Vvanr Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Petgb-1
symmetry	Space Group: P 61 2 2	R_factor 0.199 R_Free 0.270
crystal cell	length a length b length c angle alpha angle beta angle gamma 50.470 50.470 440.406 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.22 Å
ligand	CL	enzyme	Oxidoreductase E.C.1.3.1.77 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structure and epimerase activity of anthocyanidin reductase from Vitis vinifera., Gargouri M, Manigand C, Mauge C, Granier T, Langlois d'Estaintot B, Cala O, Pianet I, Bathany K, Chaudiere J, Gallois B, Acta Crystallogr D Biol Crystallogr. 2009 Sep;65(Pt 9):989-1000. Epub 2009, Aug 14. PMID:19690377

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk] Biological Unit Coordinates (2rh8.pdb1.gz) 49 Kb LPC: Ligand-Protein Contacts for 2RH8 CSU: Contacts of Structural Units for 2RH8 Likely Quarternary Molecular Structure file(s) for 2RH8 Structure Factors (125 Kb) Retrieve 2RH8 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2RH8 from S2C, [Save to disk] Re-refined 2rh8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2RH8 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2RH8

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2RH8, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2rh8_A] [2rh8] SWISS-PROT database: [Q5FB34] Domain organization of [Q5FB34_VITVI] by SWISSPFAM

Other resources with information on 2RH8

Community annotation for 2RH8 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---