2RMX Signaling Protein date Nov 30, 2007
title Solution Structure Of The Shp-1 C-Terminal Sh2 Domain Comple Tyrosine-Phosphorylated Peptide From Nkg2a
authors T.Kasai, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Riken Structur Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Tyrosine-Protein Phosphatase Non-Receptor Type 6
Chain: A
Fragment: Sh2 Domain
Synonym: Protein-Tyrosine Phosphatase 1c, Ptp-1c, Hematopoi Protein-Tyrosine Phosphatase, Sh-Ptp1, Protein-Tyrosine Pho Shp-1;
Ec: 3.1.3.48
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ptpn6, Hcp, Ptp1c
Expression_system: Cell-Free Synthesis
Expression_system_vector_type: Vector
Expression_system_vector: P040607-04
Other_details: E. Coli Cell-Free

Molecule: Nkg2-Ankg2-B Type II Integral Membrane Protein
Chain: B
Fragment: Tyrosine Phosphorylation Site, Unp Residues 1-15
Synonym: Nkg2-Ab-Activating Nk Receptor, Nk Cell Receptor Antigen;
Engineered: Yes
Synthetic: Yes
Other_details: Peptide Synthetic; This Sequence Occurs Natu Humans
methodSolution NMR
ligand PTR enzyme Hydrolase E.C.3.1.3.48 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (662 Kb) [Save to disk]
  • Biological Unit Coordinates (2rmx.pdb1.gz) 33 Kb
  • LPC: Ligand-Protein Contacts for 2RMX
  • CSU: Contacts of Structural Units for 2RMX
  • Original NMR restraints for 2RMX from PDB
  • Retrieve 2RMX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RMX from S2C, [Save to disk]
    • View 2RMX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2RMX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2RMX, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rmx_] [2rmx_A] [2rmx_B] [2rmx]
  • SWISS-PROT database: [P26715] [P29350]
  • Domain organization of [NKG2A_HUMAN] [PTN6_HUMAN] by SWISSPFAM
  • Domain found in 2RMX: [SH2 ] by SMART
    • Other resources with information on 2RMX
  • Community annotation for 2RMX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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