2RVB Solution structure of the complex between XPC acidic domain and TFIIH p62 PH domain date
authors Okuda, M., Nishimura, Y.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
B


Primary referenceStructural Insight into the Mechanism of TFIIH Recognition by the Acidic String of the Nucleotide Excision Repair Factor XPC., Okuda M, Kinoshita M, Kakumu E, Sugasawa K, Nishimura Y, Structure. 2015 Aug 10. pii: S0969-2126(15)00290-7. doi:, 10.1016/j.str.2015.07.009. PMID:26278177
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (831 Kb) [Save to disk]
  • Biological Unit Coordinates (2rvb.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 2RVB
  • Original NMR restraints for 2RVB from PDB
  • Retrieve 2RVB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2RVB from S2C, [Save to disk]
  • View 2RVB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2RVB
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • Fold representative 2rvb from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2rvb_B] [2rvb] [2rvb_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2RVB
  • Community annotation for 2RVB at PDBWiki (http://pdbwiki.org)

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