2UXZ	Hydrolase	date	Apr 02, 2007
title	Two-Carbon-Elongated Hiv-1 Protease Inhibitors With A Tertia Alcohol-Containing Transition-State Mimic
authors	N.Ginman, B.Samuelsson, A.Hallberg, J.T.Unge, T.K.Unge
compound		source
Molecule: Hiv-1 Protease Chain: A, B Fragment: Residues 501-599 Ec: 3.4.23.16 Engineered: Yes Other_details: Complex With Inhibitor Aha708a		Organism_scientific: Human Immunodeficiency Virus 1 Organism_taxid: 11676 Strain: Hiv-1 D10 Variant: D10 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Rosetta Expression_system_plasmid: Pet11d
symmetry	Space Group: P 21 21 2	R_factor 0.202 R_Free 0.213
crystal cell	length a length b length c angle alpha angle beta angle gamma 58.160 86.660 46.540 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.75 Å
ligand	HI1	enzyme	Hydrolase E.C.3.4.23.16 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	Two-carbon-elongated HIV-1 protease inhibitors with a tertiary-alcohol-containing transition-state mimic., Wu X, Ohrngren P, Ekegren JK, Unge J, Unge T, Wallberg H, Samuelsson B, Hallberg A, Larhed M, J Med Chem. 2008 Feb 28;51(4):1053-7. Epub 2008 Jan 24. PMID:18215014

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (42 Kb) [Save to disk] Biological Unit Coordinates (2uxz.pdb1.gz) 35 Kb LPC: Ligand-Protein Contacts for 2UXZ CSU: Contacts of Structural Units for 2UXZ Likely Quarternary Molecular Structure file(s) for 2UXZ Retrieve 2UXZ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2UXZ from S2C, [Save to disk]

View 2UXZ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2UXZ

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2UXZ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2uxz_B] [2uxz_A] [2uxz] SWISS-PROT database: [P03366] Domain organization of [POL_HV1B1] by SWISSPFAM

Other resources with information on 2UXZ

Community annotation for 2UXZ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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