2VAX Transferase date Sep 04, 2007
title Crystal Structure Of Deacetylcephalosporin C Acetyltransferase (Cephalosporin C-Soak)
authors S.Lejon, J.Ellis, K.Valegard
compound source
Molecule: Acetyl-Coa--Deacetylcephalosporin C Acetyltransferase;
Chain: A, B, C, D, E, F, G, H, I, J, K, L
Synonym: Dcpc-Atf, Dac Acetyltransferase, Dac-At, Deacetylcephalosporin C Acetyltransferase;
Ec: 2.3.1.175
Engineered: Yes
Organism_scientific: Acremonium Chrysogenum
Organism_taxid: 5044
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Ptwin
symmetry Space Group: P 1 21 1
R_factor 0.211 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
121.357 109.288 195.388 90.00 90.03 90.00
method X-Ray Diffractionresolution 2.6 Å
ligand ACT, CSC, OAS enzyme Transferase E.C.2.3.1.175 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, K, E, B, H, C, D, I, G, L


Primary referenceThe last step in cephalosporin C formation revealed: crystal structures of deacetylcephalosporin C acetyltransferase from Acremonium chrysogenum in complexes with reaction intermediates., Lejon S, Ellis J, Valegard K, J Mol Biol. 2008 Mar 28;377(3):935-44. Epub 2008 Jan 30. PMID:18279889
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (686 Kb) [Save to disk]
  • Biological Unit Coordinates (2vax.pdb1.gz) 121 Kb
  • Biological Unit Coordinates (2vax.pdb2.gz) 120 Kb
  • Biological Unit Coordinates (2vax.pdb3.gz) 119 Kb
  • Biological Unit Coordinates (2vax.pdb4.gz) 118 Kb
  • Biological Unit Coordinates (2vax.pdb5.gz) 119 Kb
  • Biological Unit Coordinates (2vax.pdb6.gz) 120 Kb
  • LPC: Ligand-Protein Contacts for 2VAX
  • CSU: Contacts of Structural Units for 2VAX
  • Likely Quarternary Molecular Structure file(s) for 2VAX
  • Structure Factors (2221 Kb)
  • Retrieve 2VAX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VAX from S2C, [Save to disk]
  • Re-refined 2vax structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2VAX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2VAX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2VAX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vax_J] [2vax_I] [2vax_G] [2vax] [2vax_C] [2vax_E] [2vax_F] [2vax_K] [2vax_H] [2vax_D] [2vax_A] [2vax_L] [2vax_B]
  • SWISS-PROT database: [P39058]
  • Domain organization of [CEFG_CEPAC] by SWISSPFAM
  • Other resources with information on 2VAX
  • Community annotation for 2VAX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science