2VBF date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand MG, TPP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of the branched-chain keto acid decarboxylase (KdcA) from Lactococcus lactis provides insights into the structural basis for the chemoselective and enantioselective carboligation reaction., Berthold CL, Gocke D, Wood MD, Leeper FJ, Pohl M, Schneider G, Acta Crystallogr D Biol Crystallogr. 2007 Dec;63(Pt 12):1217-24. Epub 2007, Nov 16. PMID:18084069
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (200 Kb) [Save to disk]
  • Biological Unit Coordinates (2vbf.pdb1.gz) 193 Kb
  • LPC: Ligand-Protein Contacts for 2VBF
  • CSU: Contacts of Structural Units for 2VBF
  • Likely Quarternary Molecular Structure file(s) for 2VBF
  • Structure Factors (1546 Kb)
  • Retrieve 2VBF in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VBF from S2C, [Save to disk]
  • Re-refined 2vbf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2VBF in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vbf] [2vbf_A] [2vbf_B]
  • SWISS-PROT database: [Q6QBS4]

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022,2024
    Bioinformatics Unit
    Weizmann Institute of Science