2VDD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, K	enzyme
Gene Ontology	Chain Function Process Component C, B, A
Primary reference	Assembly and channel opening in a bacterial drug efflux machine., Bavro VN, Pietras Z, Furnham N, Perez-Cano L, Fernandez-Recio J, Pei XY, Misra R, Luisi B, Mol Cell. 2008 Apr 11;30(1):114-21. PMID:18406332

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (201 Kb) [Save to disk] Biological Unit Coordinates (2vdd.pdb1.gz) 194 Kb LPC: Ligand-Protein Contacts for 2VDD CSU: Contacts of Structural Units for 2VDD Likely Quarternary Molecular Structure file(s) for 2VDD Structure Factors (460 Kb) Retrieve 2VDD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2VDD from S2C, [Save to disk] Re-refined 2vdd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2VDD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2vdd_B] [2vdd] [2vdd_A] [2vdd_C] SWISS-PROT database: [P02930] Belongs to the outer membrane factor (omf) family according to TCDB.

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