2VDY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand HCY enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe S-to-R transition of corticosteroid-binding globulin and the mechanism of hormone release., Zhou A, Wei Z, Stanley PL, Read RJ, Stein PE, Carrell RW, J Mol Biol. 2008 Jun 27;380(1):244-51. Epub 2008 May 14. PMID:18513745
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk]
  • Biological Unit Coordinates (2vdy.pdb1.gz) 59 Kb
  • Biological Unit Coordinates (2vdy.pdb2.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 2VDY
  • CSU: Contacts of Structural Units for 2VDY
  • Likely Quarternary Molecular Structure file(s) for 2VDY
  • Structure Factors (85 Kb)
  • Retrieve 2VDY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VDY from S2C, [Save to disk]
  • View 2VDY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vdy] [2vdy_A] [2vdy_B]
  • SWISS-PROT database: [P08185]
  • Domain found in 2VDY: [SERPIN ] by SMART

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