2VFX date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, MG, PE3, PE4, PEG enzyme
note 2VFX is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
B, E, J, K, G, I, H, A, C, D, F, L


Primary referenceInsights into Mad2 Regulation in the Spindle Checkpoint Revealed by the Crystal Structure of the Symmetric Mad2 Dimer., Yang M, Li B, Liu CJ, Tomchick DR, Machius M, Rizo J, Yu H, Luo X, PLoS Biol. 2008 Mar 4;6(3):e50. PMID:18318601
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (433 Kb) [Save to disk]
  • Biological Unit Coordinates (2vfx.pdb1.gz) 41 Kb
  • Biological Unit Coordinates (2vfx.pdb2.gz) 41 Kb
  • Biological Unit Coordinates (2vfx.pdb3.gz) 40 Kb
  • Biological Unit Coordinates (2vfx.pdb4.gz) 41 Kb
  • Biological Unit Coordinates (2vfx.pdb5.gz) 41 Kb
  • Biological Unit Coordinates (2vfx.pdb6.gz) 40 Kb
  • Biological Unit Coordinates (2vfx.pdb7.gz) 41 Kb
  • Biological Unit Coordinates (2vfx.pdb8.gz) 40 Kb
  • Biological Unit Coordinates (2vfx.pdb9.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 2VFX
  • CSU: Contacts of Structural Units for 2VFX
  • Likely Quarternary Molecular Structure file(s) for 2VFX
  • Structure Factors (1803 Kb)
  • Retrieve 2VFX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VFX from S2C, [Save to disk]
  • Re-refined 2vfx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2VFX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vfx] [2vfx_A] [2vfx_B] [2vfx_C] [2vfx_D] [2vfx_E] [2vfx_F] [2vfx_G] [2vfx_H] [2vfx_I] [2vfx_J] [2vfx_K] [2vfx_L]
  • SWISS-PROT database: [Q13257]

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