2VPL date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand K enzyme
Primary referenceDomain II of Thermus thermophilus ribosomal protein L1 hinders recognition of its mRNA., Tishchenko S, Kljashtorny V, Kostareva O, Nevskaya N, Nikulin A, Gulak P, Piendl W, Garber M, Nikonov S, J Mol Biol. 2008 Nov 7;383(2):301-5. Epub 2008 Aug 29. PMID:18778715
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk]
  • Biological Unit Coordinates (2vpl.pdb1.gz) 47 Kb
  • Biological Unit Coordinates (2vpl.pdb2.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 2VPL
  • CSU: Contacts of Structural Units for 2VPL
  • Likely Quarternary Molecular Structure file(s) for 2VPL
  • Structure Factors (205 Kb)
  • Retrieve 2VPL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2VPL from S2C, [Save to disk]
  • Re-refined 2vpl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2VPL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2vpl] [2vpl_A] [2vpl_B] [2vpl_C] [2vpl_D]
  • SWISS-PROT database: [P27150]

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