2VT5	Hydrolase	date	May 09, 2008
title	Fructose-1,6-Bisphosphatase(D-Fructose-1,6-Bisphosphate -1-Phosphohydrolase) (E.C.3.1.3.11) Complexed With A Dual Binding Amp Site Inhibitor
authors	A.Ruf, C.Joseph, J.Benz, B.Fol, T.Tetaz
compound		source
Molecule: Fructose-1,6-Bisphosphatase 1 Chain: A, B, C, D, E, F, G, H Synonym: D-Fructose-1,6- Bisphosphate 1-Phosphohydrolase 1, Fbpase 1; Ec: 3.1.3.11 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Tissue: Liver Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_plasmid: Pet
symmetry	Space Group: P 1 21 1	R_factor 0.203 R_Free 0.247
crystal cell	length a length b length c angle alpha angle beta angle gamma 65.964 284.611 83.375 90.00 97.52 90.00
method	X-Ray Diffraction	resolution	2.2 Å
ligand	ROK BindingDB	enzyme	Hydrolase E.C.3.1.3.11 BRENDA
Gene Ontology	Chain Function Process Component F, A, E, B, H, C, D, G
Primary reference	Allosteric FBPase inhibitors gain 10(5) times in potency when simultaneously binding two neighboring AMP sites., Hebeisen P, Kuhn B, Kohler P, Gubler M, Huber W, Kitas E, Schott B, Benz J, Joseph C, Ruf A, Bioorg Med Chem Lett. 2008 Jul 5. PMID:18650089

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (408 Kb) [Save to disk] Biological Unit Coordinates (2vt5.pdb1.gz) 204 Kb Biological Unit Coordinates (2vt5.pdb2.gz) 203 Kb LPC: Ligand-Protein Contacts for 2VT5 CSU: Contacts of Structural Units for 2VT5 Likely Quarternary Molecular Structure file(s) for 2VT5 Structure Factors (1971 Kb) Retrieve 2VT5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2VT5 from S2C, [Save to disk] Re-refined 2vt5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2VT5 in 3D

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Visual 3D analysis of 2VT5

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2VT5, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2vt5_A] [2vt5_D] [2vt5_G] [2vt5] [2vt5_B] [2vt5_F] [2vt5_C] [2vt5_E] [2vt5_H] SWISS-PROT database: [P09467] Domain organization of [F16P1_HUMAN] by SWISSPFAM

Other resources with information on 2VT5

Community annotation for 2VT5 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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