2W36	Hydrolase	date	Nov 06, 2008
title	Structures Of Endonuclease V With Dna Reveal Initiation Of D Adenine Repair
authors	B.Dalhus, A.S.Arvai, I.Rosnes, O.E.Olsen, P.H.Backe, I.Alseth, H.G J.A.Tainer, M.Bjoras
compound		source
Molecule: Endonuclease V Chain: A, B Synonym: Deoxyinosine 3'Endonuclease, Deoxyribonuclease V, Ec: 3.1.21.7 Engineered: Yes Mutation: Yes		Organism_scientific: Thermotoga Maritima Organism_taxid: 2336 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Ril Expression_system_plasmid: Pet28b
Molecule: 5'-D(Gpcpbrupapcpipgpapbrupcpgp)-3' Chain: C, E Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: 5'-D(Cpgpaptpcptpgptpapgpcp)-3' Chain: D, F Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
symmetry	Space Group: I 2 2 2	R_factor 0.217 R_Free 0.258
crystal cell	length a length b length c angle alpha angle beta angle gamma 51.979 132.239 191.616 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	BRU	enzyme	Hydrolase E.C.3.1.21.7 BRENDA
Gene Ontology	Chain Function Process Component A, B nuclease activity endonuclease activity endoribonuclease activity, p...
Primary reference	Structures of endonuclease V with DNA reveal initiation of deaminated adenine repair., Dalhus B, Arvai AS, Rosnes I, Olsen OE, Backe PH, Alseth I, Gao H, Cao W, Tainer JA, Bjoras M, Nat Struct Mol Biol. 2009 Jan 11. PMID:19136958

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk] Biological Unit Coordinates (2w36.pdb1.gz) 90 Kb Biological Unit Coordinates (2w36.pdb2.gz) 90 Kb LPC: Ligand-Protein Contacts for 2W36 CSU: Contacts of Structural Units for 2W36 Likely Quarternary Molecular Structure file(s) for 2W36 Structure Factors (347 Kb) Retrieve 2W36 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2W36 from S2C, [Save to disk] Re-refined 2w36 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2W36 in 3D

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Visual 3D analysis of 2W36

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2W36, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2w36_E] [2w36_A] [2w36_C] [2w36_D] [2w36_F] [2w36_B] [2w36] SWISS-PROT database: [Q9X2H9] Domain organization of [NFI_THEMA] by SWISSPFAM

Other resources with information on 2W36

Community annotation for 2W36 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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