2W5B Human Nek2 kinase ATPgammaS-bound date
authors Bayliss, R.
compound source
R_Free 0.245
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
ligand AGS, CL, MG enzyme

Primary referenceInsights into the Conformational Variability and Regulation of Human Nek2 Kinase., Westwood I, Cheary DM, Baxter JE, Richards MW, van Montfort RL, Fry AM, Bayliss R, J Mol Biol. 2008 Dec 24. PMID:19124027
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (100 Kb) [Save to disk]
  • Biological Unit Coordinates (2w5b.pdb1.gz) 96 Kb
  • LPC: Ligand-Protein Contacts for 2W5B
  • CSU: Contacts of Structural Units for 2W5B
  • Likely Quarternary Molecular Structure file(s) for 2W5B
  • Structure Factors (277 Kb)
  • Retrieve 2W5B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2W5B from S2C, [Save to disk]
  • Re-refined 2w5b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2W5B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2W5B
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 2W5B, from MSDmotif at EBI
  • Fold representative 2w5b from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2w5b_A] [2w5b]
  • SWISS-PROT database: [P51955]
  • Domain organization of [NEK2_HUMAN] by SWISSPFAM
  • Domain found in 2W5B: [S_TKc ] by SMART
  • Other resources with information on 2W5B
  • Community annotation for 2W5B at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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