2WLW Isomerase date Jun 26, 2009
title Structure Of The N-Terminal Capsid Domain Of Hiv-2
authors A.J.Price, F.Marzetta, M.Lammers, L.M.J.Ylinen, T.Schaller, S.J.Wilson, G.J.Towers, L.C.James
compound source
Molecule: Peptidyl-Prolyl Cis-Trans Isomerase
Chain: A
Fragment: Cypa Domain, Residues 46-210
Synonym: Trim-Cyp
Ec: 5.2.1.8
Engineered: Yes
Organism_scientific: Macaca Mulatta
Organism_taxid: 9544
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 21 21 21
R_factor 0.1540 R_Free 0.1858
crystal
cell
length a length b length c angle alpha angle beta angle gamma
35.880 51.120 75.180 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand
enzyme Isomerase E.C.5.2.1.8 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceActive site remodeling switches HIV specificity of antiretroviral TRIMCyp., Price AJ, Marzetta F, Lammers M, Ylinen LM, Schaller T, Wilson SJ, Towers GJ, James LC, Nat Struct Mol Biol. 2009 Sep 20. PMID:19767750
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk]
  • Biological Unit Coordinates (2wlw.pdb1.gz) 62 Kb
  • CSU: Contacts of Structural Units for 2WLW
  • Structure Factors (240 Kb)
  • Retrieve 2WLW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WLW from S2C, [Save to disk]
  • Re-refined 2wlw structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2WLW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2WLW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WLW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wlw_A] [2wlw]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2WLW
  • Community annotation for 2WLW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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