2WQ4 N-terminal domain of BC2L-C Lectin from Burkholderia cenocepacia date
authors Sulak, O., Cioci, G., Lahman, M., Delia, M., Varrot, A., Imberty, A., Wimmerova, M.
compound source
symmetry
R_factor
R_Free 0.16631
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.42
ligand BR, MSE, SFU enzyme
note 2WQ4 is a representative structure
Primary referenceA TNF-like trimeric lectin domain from Burkholderia cenocepacia with specificity for fucosylated human histo-blood group antigens., Sulak O, Cioci G, Delia M, Lahmann M, Varrot A, Imberty A, Wimmerova M, Structure. 2010 Jan 13;18(1):59-72. PMID:20152153
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (141 Kb) [Save to disk]
  • Biological Unit Coordinates (2wq4.pdb1.gz) 136 Kb
  • LPC: Ligand-Protein Contacts for 2WQ4
  • CSU: Contacts of Structural Units for 2WQ4
  • Structure Factors (3140 Kb)
  • Retrieve 2WQ4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2WQ4 from S2C, [Save to disk]
  • Re-refined 2wq4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2WQ4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2WQ4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2WQ4, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2wq4] [2wq4_C] [2wq4_A] [2wq4_B]
  • SWISS-PROT database: [B4EH86]
  • Domain organization of [B4EH86_BURCJ] by SWISSPFAM
    • Other resources with information on 2WQ4
  • Community annotation for 2WQ4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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