2X0A Hydrolase date Dec 07, 2009
title Mpd-Lysozyme Structure At 55.5 Kev Using A Trixxel Csi-Asi B Digital Imager And The New Esrf U22 Undulator Source At Id1
authors J.Jakoncic
compound source
Molecule: Lysozyme C
Chain: A
Synonym: 1\,4-Beta-N-Acetylmuramidase C, Allergen Gal D Iv
Ec: 3.2.1.17
 Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
symmetry Space Group: P 43 21 2
R_factor 0.146 R_Free 0.199
crystal
cell
length a length b length c angle alpha angle beta angle gamma
77.207 77.207 37.767 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.52 Å
ligand CL, MRD, NA enzyme Hydrolase E.C.3.2.1.17 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (2x0a.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 2X0A
  • CSU: Contacts of Structural Units for 2X0A
  • Structure Factors (232 Kb)
  • Retrieve 2X0A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2X0A from S2C, [Save to disk]
  • Re-refined 2x0a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2X0A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2X0A
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2X0A, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2x0a] [2x0a_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2X0A: [LYZ1 ] by SMART
    • Other resources with information on 2X0A
  • Community annotation for 2X0A at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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