2X1I Transferase date Dec 28, 2009
title Glycoside Hydrolase Family 77 4-Alpha-Glucanotransferase Fro Brockianus
authors S.M.Yoon, J.H.Jung, T.Y.Jung, H.N.Song, C.S.Park, E.J.Woo
compound source
Molecule: 4-Alpha-Glucanotransferase
Chain: A
Synonym: Amylomaltase
 Organism_scientific: Thermus Brockianus
Organism_taxid: 56956
Strain: Jcm11602
symmetry Space Group: P 65 2 2
R_factor 0.215 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
104.357 104.357 263.759 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.36 Å
ligand INS, PO4, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • 4-alpha-glucanotransferase a...


    • Primary referenceStructural and functional analysis of substrate recognition by the 250s loop in amylomaltase from Thermus brockianus., Jung JH, Jung TY, Seo DH, Yoon SM, Choi HC, Park BC, Park CS, Woo EJ, Proteins. 2011 Feb;79(2):633-44. PMID:21117235
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (88 Kb) [Save to disk]
  • Biological Unit Coordinates (2x1i.pdb1.gz) 83 Kb
  • LPC: Ligand-Protein Contacts for 2X1I
  • CSU: Contacts of Structural Units for 2X1I
  • Structure Factors (247 Kb)
  • Retrieve 2X1I in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2X1I from S2C, [Save to disk]
  • Re-refined 2x1i structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2X1I in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2X1I
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2X1I, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2x1i] [2x1i_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2X1I
  • Community annotation for 2X1I at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science