2X24 Ligase date Jan 11, 2010
title Bovine Acc2 Ct Domain In Complex With Inhibitor
authors L.Oster, R.Folmer, S.Blaho, F.Wiberg, K.Hallberg
compound source
Molecule: Acetyl-Coa Carboxylase
Chain: A, B
Engineered: Yes
 Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.232 R_Free 0.283
crystal
cell
length a length b length c angle alpha angle beta angle gamma
225.193 104.867 85.078 90.00 95.67 90.00
method X-Ray Diffractionresolution 2.40 Å
ligand X24 BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceDesign of small molecule inhibitors of acetyl-CoA carboxylase 1 and 2 showing reduction of hepatic malonyl-CoA levels in vivo in obese Zucker rats., Bengtsson C, Blaho S, Saitton DB, Brickmann K, Broddefalk J, Davidsson O, Drmota T, Folmer R, Hallberg K, Hallen S, Hovland R, Isin E, Johannesson P, Kull B, Larsson LO, Lofgren L, Nilsson KE, Noeske T, Oakes N, Plowright AT, Schnecke V, Stahlberg P, Sorme P, Wan H, Wellner E, Oster L, Bioorg Med Chem. 2011 May 15;19(10):3039-53. Epub 2011 Apr 13. PMID:21515056
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (225 Kb) [Save to disk]
  • Biological Unit Coordinates (2x24.pdb1.gz) 218 Kb
  • LPC: Ligand-Protein Contacts for 2X24
  • CSU: Contacts of Structural Units for 2X24
  • Structure Factors (1050 Kb)
  • Retrieve 2X24 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2X24 from S2C, [Save to disk]
  • Re-refined 2x24 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2X24 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2X24
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2X24, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2x24] [2x24_A] [2x24_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2X24
  • Community annotation for 2X24 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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