OCA Atlas for 2X86

2X86

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

ADP, BMA, NAP

enzyme

Gene
Ontology

Chain	Function	Process	Component
D, R, F, S, K, J, L, E, M, A, P, H, I, C, T, G, O, B, N, Q

Primary reference

The crystal structure of the Y140F mutant of ADP-L-glycero-D-manno-heptose 6-epimerase bound to ADP-beta-D-mannose suggests a one base mechanism., Kowatz T, Morrison JP, Tanner ME, Naismith JH, Protein Sci. 2010 May 5. PMID:20506248

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1017 Kb) [Save to disk]

Biological Unit Coordinates (2x86.pdb1.gz) 257 Kb

Biological Unit Coordinates (2x86.pdb2.gz) 258 Kb

Biological Unit Coordinates (2x86.pdb3.gz) 257 Kb

Biological Unit Coordinates (2x86.pdb4.gz) 256 Kb

LPC: Ligand-Protein Contacts for 2X86

CSU: Contacts of Structural Units for 2X86

Structure Factors (1635 Kb)

Retrieve 2X86 in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2X86 from S2C, [Save to disk]

Re-refined 2x86 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2X86 in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2x86_I] [2x86_J] [2x86_K] [2x86_L] [2x86_M] [2x86_N] [2x86_O] [2x86_P] [2x86_Q] [2x86_R] [2x86_S] [2x86_T] [2x86] [2x86_A] [2x86_B] [2x86_C] [2x86_D] [2x86_E] [2x86_F] [2x86_G] [2x86_H]

SWISS-PROT database:

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