2XAE Cell Cycle date Mar 31, 2010
title Crystal Structure Of Human Kinesin Eg5 In Complex With (R)-2 ((S)-2-Methyl-1,1-Diphenylbutylthio)Propanoic Acid
authors H.Y.K.Kaan, J.Weiss, D.Menger, V.Ulaganathan, K.Tkocz, C.Laggner, F.Popowycz, B.Joseph, F.Kozielski
compound source
Molecule: Kinesin-Like Protein Kif11
Chain: A, B, C
Fragment: Motor Domain, Residues 1-368
Synonym: Eg5, Kinesin-Related Motor Protein Eg5, Kinesin-Li Protein Hksp, Thyroid Receptor-Interacting Protein 5, Tr-In Protein 5, Trip-5, Kinesin-Like Protein 1;
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: Plyss
symmetry Space Group: P 32
R_factor 0.181 R_Free 0.257
crystal
cell
length a length b length c angle alpha angle beta angle gamma
96.770 96.770 124.751 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.60 Å
ligand 2XA, ADP, CL, MG, SO4 BindingDB enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceStructure-Activity Relationship and Multidrug Resistance Study of New S-trityl-l-Cysteine Derivatives As Inhibitors of Eg5., Kaan HY, Weiss J, Menger D, Ulaganathan V, Tkocz K, Laggner C, Popowycz F, Joseph B, Kozielski F, J Med Chem. 2011 Mar 24;54(6):1576-1586. Epub 2011 Feb 23. PMID:21344920
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (175 Kb) [Save to disk]
  • Biological Unit Coordinates (2xae.pdb1.gz) 167 Kb
  • LPC: Ligand-Protein Contacts for 2XAE
  • CSU: Contacts of Structural Units for 2XAE
  • Structure Factors (550 Kb)
  • Retrieve 2XAE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XAE from S2C, [Save to disk]
  • Re-refined 2xae structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2XAE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2XAE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2XAE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xae_B] [2xae_C] [2xae_A] [2xae]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2XAE: [KISc ] by SMART
  • Other resources with information on 2XAE
  • Community annotation for 2XAE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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