2XD8 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceStructural changes in a marine podovirus associated with release of its genome into Prochlorococcus., Liu X, Zhang Q, Murata K, Baker ML, Sullivan MB, Fu C, Dougherty MT, Schmid MF, Osburne MS, Chisholm SW, Chiu W, Nat Struct Mol Biol. 2010 Jul;17(7):830-6. Epub 2010 Jun 13. PMID:20543830
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (50 Kb) [Save to disk]
  • Biological Unit Coordinates (2xd8.pdb1.gz) 2673 Kb
  • CSU: Contacts of Structural Units for 2XD8
  • Retrieve 2XD8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XD8 from S2C, [Save to disk]
    • View 2XD8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xd8] [2xd8_A] [2xd8_B] [2xd8_C] [2xd8_D] [2xd8_E] [2xd8_F] [2xd8_G]
  • SWISS-PROT database:

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