2XD9 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand XD9 enzyme
Gene
Ontology
ChainFunctionProcessComponent
C, A, B


Primary referenceTetrahydrobenzothiophene derivatives: conformationally restricted inhibitors of type II dehydroquinase., Paz S, Tizon L, Otero JM, Llamas-Saiz AL, Fox GC, van Raaij MJ, Lamb H, Hawkins AR, Lapthorn AJ, Castedo L, Gonzalez-Bello C, ChemMedChem. 2011 Feb 7;6(2):266-72. doi: 10.1002/cmdc.201000343. Epub 2010 Nov, 10. PMID:21275050
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (2xd9.pdb1.gz) 309 Kb
  • LPC: Ligand-Protein Contacts for 2XD9
  • CSU: Contacts of Structural Units for 2XD9
  • Structure Factors (2091 Kb)
  • Retrieve 2XD9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XD9 from S2C, [Save to disk]
  • Re-refined 2xd9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2XD9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xd9] [2xd9_A] [2xd9_B] [2xd9_C]
  • SWISS-PROT database:

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