2XOA Metal Transport date Aug 10, 2010
title Crystal Structure Of The N-Terminal Three Domains Of The Skeletal Muscle Ryanodine Receptor (Ryr1)
authors C.Tung, P.A.Lobo, L.Kimlicka, F.Van Petegem
compound source
Molecule: Ryanodine Receptor 1
Chain: A
Fragment: N-Terminal Disease Hot Spot, Residues 1-559
Synonym: Ryr-1, Ryr1, Skeletal Muscle-Type Ryanodine Recept Skeletal Muscle Calcium Release Channel;
Engineered: Yes
Organism_scientific: Oryctolagus Cuniculus
Organism_common: Rabbit
Organism_taxid: 9986
Tissue: Skeletal Muscle
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Rosetta De3 Placi
Expression_system_plasmid: Pet28hmt
symmetry Space Group: H 3 2
R_factor 0.20909 R_Free 0.23373
crystal
cell
length a length b length c angle alpha angle beta angle gamma
170.800 170.800 301.200 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe amino-terminal disease hotspot of ryanodine receptors forms a cytoplasmic vestibule., Tung CC, Lobo PA, Kimlicka L, Van Petegem F, Nature. 2010 Nov 3. PMID:21048710
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (158 Kb) [Save to disk]
  • Biological Unit Coordinates (2xoa.pdb1.gz) 152 Kb
  • CSU: Contacts of Structural Units for 2XOA
  • Structure Factors (5926 Kb)
  • Retrieve 2XOA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2XOA from S2C, [Save to disk]
  • Re-refined 2xoa structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2XOA in 3D
  • Proteopedia, because life has more than 2D.
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  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2XOA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2XOA, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2xoa_A] [2xoa]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2XOA: [MIR ] by SMART
  • Other resources with information on 2XOA
  • Community annotation for 2XOA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
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