2XVG	Hydrolase	date	Oct 26, 2010
title	Crystal Structure Of Alpha-Xylosidase (Gh31) From Cellvibrio Japonicus
authors	J.Larsbrink, A.Izumi, F.Ibatullin, A.Nakhai, H.J.Gilbert, G.J.Dav H.Brumer
compound		source
Molecule: Alpha Xylosidase Chain: A Ec: 3.2.1.-		Organism_scientific: Cellvibrio Japonicus Organism_taxid: 155077
symmetry	Space Group: P 63 2 2	R_factor 0.2038 R_Free 0.2590
crystal cell	length a length b length c angle alpha angle beta angle gamma 156.193 156.193 227.759 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	CL, EDO, NI, SO4	enzyme	Hydrolase E.C.3.2.1 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structural and enzymatic characterisation of a Glycoside Hydrolase Family 31 alphaxylosidase from Cellvibrio japonicus involved in xyloglucan saccharification., Larsbrink J, Izumi A, Ibatullin F, Nakhai A, Gilbert HJ, Davies GJ, Brumer H, Biochem J. 2011 Mar 22. PMID:21426303

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (333 Kb) [Save to disk] Biological Unit Coordinates (2xvg.pdb1.gz) 327 Kb LPC: Ligand-Protein Contacts for 2XVG CSU: Contacts of Structural Units for 2XVG Structure Factors (397 Kb) Retrieve 2XVG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2XVG from S2C, [Save to disk] Re-refined 2xvg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2XVG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2XVG

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2XVG, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2xvg_A] [2xvg] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 2XVG: [PA14 ] by SMART

Other resources with information on 2XVG

Community annotation for 2XVG at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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