2Y00	Receptor	date	Nov 30, 2010
title	Turkey Beta1 Adrenergic Receptor With Stabilising Mutations Partial Agonist Dobutamine (Crystal Dob92)
authors	A.Warne, R.Moukhametzianov, J.G.Baker, R.Nehme, P.C.Edwards, A.G. G.F.X.Schertler, C.G.Tate
compound		source
Molecule: Beta-1 Adrenergic Receptor Chain: A, B Fragment: Residues 33-368 Synonym: Beta-1 Adrenoreceptor, Beta-1 Adrenoceptor, Beta-T Engineered: Yes Mutation: Yes Other_details: Residues 3-32 At The N-Terminus And Residues Of The Third Intracellular Loop Were Deleted From The Const Construct Was Truncated After Residue 367 And A Hexahis Tag		Organism_scientific: Meleagris Gallopavo Organism_common: Turkey Organism_taxid: 9103 Cell: Erythrocyte Expression_system: Trichoplusia Ni Expression_system_common: Cabbage Looper Expression_system_taxid: 7111 Expression_system_cell_line: High Five Expression_system_vector_type: Baculovirus Expression_system_plasmid: Pbacpak8
symmetry	Space Group: P 1 21 1	R_factor 0.226 R_Free 0.256
crystal cell	length a length b length c angle alpha angle beta angle gamma 90.000 60.500 101.900 90.00 110.20 90.00
method	X-Ray Diffraction	resolution	2.50 Å
ligand	2CV, NA, Y00, Y01	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	The structural basis for agonist and partial agonist action on a beta(1)-adrenergic receptor., Warne T, Moukhametzianov R, Baker JG, Nehme R, Edwards PC, Leslie AG, Schertler GF, Tate CG, Nature. 2011 Jan 13;469(7329):241-4. PMID:21228877

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk] Biological Unit Coordinates (2y00.pdb1.gz) 51 Kb Biological Unit Coordinates (2y00.pdb2.gz) 53 Kb Biological Unit Coordinates (2y00.pdb3.gz) 102 Kb LPC: Ligand-Protein Contacts for 2Y00 CSU: Contacts of Structural Units for 2Y00 Structure Factors (260 Kb) Retrieve 2Y00 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2Y00 from S2C, [Save to disk] Re-refined 2y00 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2Y00 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2Y00

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2Y00, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2y00_A] [2y00] [2y00_B] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 2Y00

Community annotation for 2Y00 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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