2Y0S date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand F3S, MG, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
B, R


C, Y


D, S


E, T


H, Z


I, K


L, M


N, O


P, X


U, F


W, A


Primary referenceArchaeal RNA polymerase: the influence of the protruding stalk in crystal packing and preliminary biophysical analysis of the Rpo13 subunit., Wojtas M, Peralta B, Ondiviela M, Mogni M, Bell SD, Abrescia NG, Biochem Soc Trans. 2011 Jan 19;39(1):25-30. PMID:21265742
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (2224 Kb) [Save to disk]
  • Biological Unit Coordinates (2y0s.pdb1.gz) 1112 Kb
  • Biological Unit Coordinates (2y0s.pdb2.gz) 1111 Kb
  • LPC: Ligand-Protein Contacts for 2Y0S
  • CSU: Contacts of Structural Units for 2Y0S
  • Structure Factors (874 Kb)
  • Retrieve 2Y0S in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Y0S from S2C, [Save to disk]
  • Re-refined 2y0s structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2Y0S in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2y0s_S] [2y0s_R] [2y0s_T] [2y0s_U] [2y0s_V] [2y0s_W] [2y0s_X] [2y0s_Y] [2y0s_Z] [2y0s] [2y0s_A] [2y0s_B] [2y0s_C] [2y0s_D] [2y0s_E] [2y0s_F] [2y0s_G] [2y0s_H] [2y0s_I] [2y0s_J] [2y0s_K] [2y0s_L] [2y0s_M] [2y0s_N] [2y0s_O] [2y0s_P] [2y0s_Q]
  • SWISS-PROT database:
  • Domains found in 2Y0S: [RNA_pol_Rpb6] [RPOLA_N] [RPOLCX] [RPOLD] [S1 ] by SMART

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