2Y1J date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand QBT, SO4, THM enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • DNA-directed DNA polymerase ...
  • 3'-5' exonuclease activity


  • Primary referenceCrystal structures and repair studies reveal the identity and the base-pairing properties of the UV-induced spore photoproduct DNA lesion., Heil K, Kneuttinger AC, Schneider S, Lischke U, Carell T, Chemistry. 2011 Aug 22;17(35):9651-7. doi: 10.1002/chem.201100177. Epub, 2011 Jul 20. PMID:21780197
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk]
  • Biological Unit Coordinates (2y1j.pdb1.gz) 104 Kb
  • LPC: Ligand-Protein Contacts for 2Y1J
  • CSU: Contacts of Structural Units for 2Y1J
  • Structure Factors (367 Kb)
  • Retrieve 2Y1J in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2Y1J from S2C, [Save to disk]
  • Re-refined 2y1j structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2Y1J in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2y1j] [2y1j_A] [2y1j_B] [2y1j_C]
  • SWISS-PROT database:
  • Domains found in 2Y1J: [35EXOc] [POLAc ] by SMART

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