2Y5F		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	NA, XWG	enzyme
note	2Y5F is a representative structure
Gene Ontology	Chain Function Process Component A
Primary reference	Molecular Recognition at the Active Site of Factor Xa: Cation-pi Interactions, Stacking on Planar Peptide Surfaces, and Replacement of Structural Water., Salonen LM, Holland MC, Kaib PS, Haap W, Benz J, Mary JL, Kuster O, Schweizer WB, Banner DW, Diederich F, Chemistry. 2011 Dec 9. doi: 10.1002/chem.201102571. PMID:22162109

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk] Biological Unit Coordinates (2y5f.pdb1.gz) 178 Kb LPC: Ligand-Protein Contacts for 2Y5F CSU: Contacts of Structural Units for 2Y5F Structure Factors (1187 Kb) Retrieve 2Y5F in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2Y5F from S2C, [Save to disk] Re-refined 2y5f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2Y5F in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2y5f] [2y5f_A] [2y5f_L] SWISS-PROT database: Domains found in 2Y5F: [EGF] [Tryp_SPc ] by SMART

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