2Y5T		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, GOL, HYP	enzyme
Primary reference	Crystal structure of an arthritogenic anticollagen immune complex., Dobritzsch D, Lindh I, Uysal H, Nandakumar KS, Burkhardt H, Schneider G, Holmdahl R, Arthritis Rheum. 2011 Dec;63(12):3740-8. doi: 10.1002/art.30611. PMID:22127694

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (176 Kb) [Save to disk] Biological Unit Coordinates (2y5t.pdb1.gz) 166 Kb LPC: Ligand-Protein Contacts for 2Y5T CSU: Contacts of Structural Units for 2Y5T Structure Factors (443 Kb) Retrieve 2Y5T in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2Y5T from S2C, [Save to disk] Re-refined 2y5t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2Y5T in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2y5t] [2y5t_A] [2y5t_B] [2y5t_E] [2y5t_F] [2y5t_G] SWISS-PROT database: Domains found in 2Y5T: [IG_like] [IGv ] by SMART

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