OCA Atlas for 2Y9J

2Y9J

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

Gene
Ontology

Chain	Function	Process	Component
R, Q, C, H, K, T, G, N, S, W, A, O, E, D, B, L, J, P, F, X, U, M, V, I
g, b, d, q, h, f, i, o, t, a, l, s, p, k, r, m, v, Y, e, j, c, Z, u, n

Primary reference

Three-dimensional model of Salmonella's needle complex at subnanometer resolution., Schraidt O, Marlovits TC, Science. 2011 Mar 4;331(6021):1192-5. PMID:21385715

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1292 Kb) [Save to disk]

Biological Unit Coordinates (2y9j.pdb1.gz) 1287 Kb

CSU: Contacts of Structural Units for 2Y9J

Retrieve 2Y9J in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 2Y9J from S2C, [Save to disk]

View 2Y9J in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2y9j_A] [2y9j_B] [2y9j_C] [2y9j_D] [2y9j_E] [2y9j_F] [2y9j_G] [2y9j_H] [2y9j_I] [2y9j_J] [2y9j_K] [2y9j_L] [2y9j_M] [2y9j_N] [2y9j_O] [2y9j_P] [2y9j_Q] [2y9j_R] [2y9j] [2y9j_S] [2y9j_T] [2y9j_U] [2y9j_V] [2y9j_W] [2y9j_X] [2y9j_Y] [2y9j_Z] [2y9j_a] [2y9j_b] [2y9j_c] [2y9j_d] [2y9j_e] [2y9j_f] [2y9j_g] [2y9j_h] [2y9j_i] [2y9j_j] [2y9j_k] [2y9j_l] [2y9j_m] [2y9j_n] [2y9j_o] [2y9j_p] [2y9j_q] [2y9j_r] [2y9j_s] [2y9j_t] [2y9j_u] [2y9j_v]

SWISS-PROT database:

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