2YA1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BGC, GLC, NA, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe conformation and function of a multimodular glycogen-degrading pneumococcal virulence factor., Lammerts van Bueren A, Ficko-Blean E, Pluvinage B, Hehemann JH, Higgins MA, Deng L, Ogunniyi AD, Stroeher UH, El Warry N, Burke RD, Czjzek M, Paton JC, Vocadlo DJ, Boraston AB, Structure. 2011 May 11;19(5):640-51. PMID:21565699
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk]
  • Biological Unit Coordinates (2ya1.pdb1.gz) 171 Kb
  • LPC: Ligand-Protein Contacts for 2YA1
  • CSU: Contacts of Structural Units for 2YA1
  • Structure Factors (813 Kb)
  • Retrieve 2YA1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2YA1 from S2C, [Save to disk]
  • Re-refined 2ya1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2YA1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ya1] [2ya1_A]
  • SWISS-PROT database:
  • Domain found in 2YA1: [Aamy ] by SMART

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