2YD2		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	CL, IOD	enzyme
Primary reference	Proteoglycan-Specific Molecular Switch for RPTP{sigma} Clustering and Neuronal Extension., Coles CH, Shen Y, Tenney AP, Siebold C, Sutton GC, Lu W, Gallagher JT, Jones EY, Flanagan JG, Aricescu AR, Science. 2011 Mar 31. PMID:21454754

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk] Biological Unit Coordinates (2yd2.pdb1.gz) 61 Kb LPC: Ligand-Protein Contacts for 2YD2 CSU: Contacts of Structural Units for 2YD2 Structure Factors (117 Kb) Retrieve 2YD2 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YD2 from S2C, [Save to disk] Re-refined 2yd2 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YD2 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2yd2] [2yd2_A] SWISS-PROT database: Domain found in 2YD2: [IGc2 ] by SMART

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---