2YDL		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
Gene Ontology	Chain Function Process Component A
Primary reference	Distinct Ubiquitin Binding Modes Exhibited by SH3 Domains: Molecular Determinants and Functional Implications., Ortega Roldan JL, Casares S, Ringkjobing Jensen M, Cardenes N, Bravo J, Blackledge M, Azuaga AI, van Nuland NA, PLoS One. 2013 Sep 11;8(9):e73018. doi: 10.1371/journal.pone.0073018. PMID:24039852

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (16 Kb) [Save to disk] Biological Unit Coordinates (2ydl.pdb1.gz) 12 Kb CSU: Contacts of Structural Units for 2YDL Structure Factors (259 Kb) Retrieve 2YDL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2YDL from S2C, [Save to disk] Re-refined 2ydl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2YDL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ydl] [2ydl_A] SWISS-PROT database: Domain found in 2YDL: [SH3 ] by SMART

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